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fernandomayer
Oct 1st, 2024
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  1. [mayer@eextremes Git]$ R CMD check --as-cran SpatialGEV_1.0.2.tar.gz
  2. * using log directory ‘/home/mayer/Git/SpatialGEV.Rcheck’
  3. * using R version 4.4.1 (2024-06-14)
  4. * using platform: x86_64-pc-linux-gnu
  5. * R was compiled by
  6.     gcc (GCC) 14.1.1 20240522
  7.     GNU Fortran (GCC) 14.1.1 20240522
  8. * running under: Arch Linux
  9. * using session charset: UTF-8
  10. * using option ‘--as-cran’
  11. * checking for file ‘SpatialGEV/DESCRIPTION’ ... OK
  12. * this is package ‘SpatialGEV’ version ‘1.0.2’
  13. * package encoding: UTF-8
  14. * checking CRAN incoming feasibility ... [4s/84s] NOTE
  15. Maintainer: ‘Meixi Chen <meixi.chen@uwaterloo.ca>’
  16.  
  17. Suggests or Enhances not in mainstream repositories:
  18.   INLA
  19. Availability using Additional_repositories specification:
  20.   INLA   yes   https://inla.r-inla-download.org/R/stable/
  21.  
  22. Found the following (possibly) invalid URLs:
  23.   URL: https://codecov.io/github/meixichen/SpatialGEV (moved to https://app.codecov.io/github/meixichen/SpatialGEV)
  24.     From: README.md
  25.     Status: 200
  26.     Message: OK
  27.  
  28. Size of tarball: 31835853 bytes
  29. * checking package namespace information ... OK
  30. * checking package dependencies ... OK
  31. * checking if this is a source package ... NOTE
  32. Found the following apparent object files/libraries:
  33.   src/TMB/SpatialGEV_TMBExports.o src/TMB/SpatialGEV_TMBExports.so
  34. Object files/libraries should not be included in a source package.
  35. * checking if there is a namespace ... OK
  36. * checking for executable files ... OK
  37. * checking for hidden files and directories ... OK
  38. * checking for portable file names ... OK
  39. * checking for sufficient/correct file permissions ... OK
  40. * checking whether package ‘SpatialGEV’ can be installed ... OK
  41. * used C++ compiler: ‘g++ (GCC) 14.2.1 20240910’
  42. * checking installed package size ... NOTE
  43.   installed size is 83.9Mb
  44.   sub-directories of 1Mb or more:
  45.     libs  82.6Mb
  46. * checking package directory ... OK
  47. * checking for future file timestamps ... OK
  48. * checking ‘build’ directory ... OK
  49. * checking DESCRIPTION meta-information ... OK
  50. * checking top-level files ... OK
  51. * checking for left-over files ... OK
  52. * checking index information ... OK
  53. * checking package subdirectories ... OK
  54. * checking code files for non-ASCII characters ... OK
  55. * checking R files for syntax errors ... OK
  56. * checking whether the package can be loaded ... OK
  57. * checking whether the package can be loaded with stated dependencies ... OK
  58. * checking whether the package can be unloaded cleanly ... OK
  59. * checking whether the namespace can be loaded with stated dependencies ... OK
  60. * checking whether the namespace can be unloaded cleanly ... OK
  61. * checking loading without being on the library search path ... OK
  62. * checking use of S3 registration ... OK
  63. * checking dependencies in R code ... OK
  64. * checking S3 generic/method consistency ... OK
  65. * checking replacement functions ... OK
  66. * checking foreign function calls ... OK
  67. * checking R code for possible problems ... OK
  68. * checking Rd files ... OK
  69. * checking Rd metadata ... OK
  70. * checking Rd line widths ... OK
  71. * checking Rd cross-references ... OK
  72. * checking for missing documentation entries ... OK
  73. * checking for code/documentation mismatches ... OK
  74. * checking Rd \usage sections ... OK
  75. * checking Rd contents ... OK
  76. * checking for unstated dependencies in examples ... OK
  77. * checking contents of ‘data’ directory ... OK
  78. * checking data for non-ASCII characters ... OK
  79. * checking LazyData ... OK
  80. * checking data for ASCII and uncompressed saves ... OK
  81. * checking line endings in C/C++/Fortran sources/headers ... OK
  82. * checking line endings in Makefiles ... OK
  83. * checking compilation flags in Makevars ... OK
  84. * checking for GNU extensions in Makefiles ... OK
  85. * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  86. * checking use of PKG_*FLAGS in Makefiles ... OK
  87. * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
  88. * checking pragmas in C/C++ headers and code ... OK
  89. * checking compilation flags used ... OK
  90. * checking compiled code ... OK
  91. * checking installed files from ‘inst/doc’ ... OK
  92. * checking files in ‘vignettes’ ... OK
  93. * checking examples ... OK
  94. * checking examples with --run-donttest ... [17s/17s] OK
  95. * checking for unstated dependencies in ‘tests’ ... OK
  96. * checking tests ...
  97.   Running ‘testthat.R’ [125s/125s]
  98.  [125s/125s] OK
  99. * checking for unstated dependencies in vignettes ... OK
  100. * checking package vignettes ... OK
  101. * checking re-building of vignette outputs ... [333s/333s] OK
  102. * checking PDF version of manual ... OK
  103. * checking HTML version of manual ... NOTE
  104. Skipping checking math rendering: package 'V8' unavailable
  105. * checking for non-standard things in the check directory ... OK
  106. * checking for detritus in the temp directory ... OK
  107. * DONE
  108.  
Tags: SpatialGEV
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